Bioperl-L

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Unmoderated list for general discussion of bioperl modules, current & future efforts and related topics.
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Topics (4364)
Replies Last Post Views
Parent/parent_id attribute by Daniel Lang-3
3
by Fields, Christopher ...
Problems when using PAML::yn00 by Cacau Centurion
0
by Cacau Centurion
The NIH Software Discovery Index | We invite your comments -- a system for linking software, publications and users in the research community. by Andreas Prlic
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by Andreas Prlic
Getting pairwise alignment scores for existing multiple alignment by Alexey Morozov-2
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by Alexey Morozov-2
Spankin' new (alpha) build system for Bioperl-Run by Mark A. Jensen
2
by Dave Messina-4
Invalid EMBL files generated in rare circumstances; line wrapping by Adam Sjøgren-2
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by Adam Sjøgren
Whither Bio::FeatureIO? by George Hartzell-2
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by Fields, Christopher ...
memory leak in Bio::Species by Dmitry Karasik
2
by Mark A. Jensen
web site? by D. Joe Anderson-4
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by Fields, Christopher ...
Fwd: [Bosc-announce] Questionnaire about BOSC 2014 and 2015 by Peter Cock
0
by Peter Cock
Converting pdb files to dssp file by vandana Baranwal
1
by Brian Osborne-3
Add to SeqFeature::Generic? by Brian Osborne-2
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by Fields, Christopher ...
Proposal for bioperl-run by Mark A. Jensen
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by Mark A. Jensen
Extract sequences of CDS regions from Genbank formatted file by Cacau Centurion
3
by Brian Osborne-2
500 Can't connect to www.ncbi.nlm.nih.gov:80 (Bad hostname) by RB
1
by Fields, Christopher ...
fasta36 bug report by Antony03
3
by Fields, Christopher ...
help! by Casandra-12
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by Fields, Christopher ...
Bio::SearchIO::infernal.pm by Ashton Trey Belew
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by Fields, Christopher ...
EU OBF Codefest - September 18th and 19th 2014 @ EBI - Hinxton UK by Francesco Strozzi
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by Francesco Strozzi
Problem with StandAloneBlastPlus by Darío Carballido
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by Darío Carballido
[Announcement] Moving to GitHub Issues! by Fields, Christopher ...
1
by Hilmar Lapp-5
"->bits" behaviour in HMMer parsing by Francisco J. Ossandó...
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by Francisco J. Ossandó...
length of hit->description by Antony03
9
by Antony03
Would like to recover my wiki acct pls by Mark A. Jensen
1
by Fields, Christopher ...
Problem with revcom by Antony03
5
by Mark A. Jensen
use Bio::SeqIO to read Fasta sequence from pipe, or @ARGV, like "while (<>) {....}" by Haiyan Lin
13
by Haiyan Lin
回复: Re: use Bio::SeqIO to read Fasta sequence from pipe, or @ARGV, like "while (<>) {....}" by Haiyan Lin
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by Haiyan Lin
Limitations for Bio::DB::Fasta by Ki Baik
1
by Fields, Christopher ...
MSG when using Bio::DB::Taxonomy by Cacau Centurion
1
by Fields, Christopher ...
extract mRNA sequence from mysql database using Bio::DB::SeqFeature::Store by Firoz Ahmed
0
by Firoz Ahmed
Re: Please help me in using e-PCR parser module "Bio::Tools::EPCR" by Jason Stajich-3
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by Jason Stajich-3
Extracting the exon sequence of genome from GBrowse database by Firoz Ahmed
0
by Firoz Ahmed
Re: BioPerl question by Brian Osborne-3
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by Brian Osborne-3
Bio::Tools::EPCR and GFF3 by Firoz Ahmed
0
by Firoz Ahmed
Build.PL? Can't I just use bioperl-live from github? (rosalind.info looks cool) by Jay Hannah
4
by Fields, Christopher ...
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