We have had several BioPerl project proposals over the years, including work on adding new functionality, speeding up BioPerl, and porting essential code to Perl 6. Feel free to post ideas and potential project to the Github repo below and we can comment.
Keep in mind these will need potential mentors, therefore discussion on this list is a good idea.
On 1/20/17, 8:04 AM, "Open-Bio-l on behalf of Kai Blin" <open-bio-l-bounces+cjfields=[hidden email] on behalf of [hidden email]> wrote:
Dear Open Bioinformatics Foundation community,
It's 2017, and Google is again organizing the Google Summer of Code.
The Open Bioinformatics Foundation will be applying again, and we again
are looking for member projects to post project proposals under the OBF
umbrella. Just as last year, we not only accept projects from our "core
projects", but will consider proposals from "related" bioinformatics
projects as well. To illustrate, last year the OBF GSoC students worked
on projects for the ETE toolkit, the Common Workflow Language, the
GeneNetwork genome browser, Bionode, openSNP and antiSMASH.
OBF's GSoC website can be found at http://obf.github.io/GSoC/
If you are interested in mentoring a GSoC student working on your
project this summer, add your project proposals as pull requests to
Please note that a project proposal needs to have two mentors from your
member project willing to support the student.
Poject proposals should look like this:
### Title, a short, clear summary of the project
A bit of background about the project proposal. Why is this relevant for
your project, what preexisting work does it build on?
A short sketch on how you think it would be possible to implement the
project in three month's worth of time.
#### Languages and skills
a bullet list of
* anything else
needed to complete the project
Relevant links to your project's source code repositories
Try to judge the difficulty here. The scale we have used is "easy",
Names and contact information for at least two mentors willing to mentor
a student working on this proposal.
Also, as we need to make sure to apply in time, please make sure to send
in your pull requests before Thursday, February 2nd. I apologize for the
short notice, but as usual, real life deadlines happen.
Let me know if you have any further questions about this.
Kai Blin [hidden email]
PostDoc / Scientific Software Engineer
DTU Biosustain http://www.biosustain.dtu.dk/
Lyngby Campus, Building 220, room 327F
DK - 2800 Kgs. Lyngby
mobile: +45 93511306 twitter: @kaiblin
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